
A new digital atlas allows users to explore human organs in three dimensions with an unprecedented level of detail, making it possible to move seamlessly from a full-organ view down to individual cells. The project, called the Human Organ Atlas, was presented in the journal Science Advances by an international team led by University College London and the European Synchrotron Radiation Facility (ESRF) in Grenoble. The open-access platform, available through a standard web browser, offers an experience similar to Google Earth applied to human anatomy, enabling users to navigate inside organs such as the brain, heart, lungs, liver, and kidneys and examine their internal structures with remarkable precision.
The project is powered by an advanced imaging technology known as Hierarchical Phase-Contrast Tomography (HiP-CT), developed at the ESRF synchrotron. Using an extremely bright light source—up to 100 billion times more intense than conventional hospital CT scanners—researchers can scan intact human organs without destroying them and zoom in to near-cellular resolution, below one micron. This approach bridges a longstanding gap between radiology and histology, allowing scientists to observe anatomical structures across multiple scales within the same sample for the first time.
Bringing together scientists and clinicians from nine institutions worldwide, the consortium behind the atlas is expected to expand and drive new discoveries in diseases ranging from osteoarthritis to heart conditions. The project began during the COVID-19 pandemic and has already contributed to significant findings, including the identification of microscopic damage to blood vessels in the lungs of patients who died from the disease. The technology has also been applied to studies of the heart and various gynecological conditions, providing new insights into disease mechanisms.
The atlas currently includes dozens of organs from 25 donors and hundreds of three-dimensional datasets. The scans cover 11 types of organs, including the brain, heart, lungs, liver, kidneys, colon, spleen, placenta, uterus, prostate, and testes. The images allow users to move from the scale of the entire organ down to details smaller than two micrometers, and in some cases as fine as 0.65 micrometers. To make these massive datasets—often hundreds of gigabytes or even terabytes—accessible, the platform provides interactive browser-based visualization, downloadable data at multiple resolutions, and software tools for analysis.
According to the researchers, these ultra-high-resolution 3D datasets could become a key resource for artificial intelligence, which relies on large anatomical datasets to train algorithms capable of detecting diseases and analyzing complex biological structures. Beyond research, the atlas could also transform the teaching of anatomy by enabling students and educators to explore organs interactively rather than relying solely on static images. For the scientists involved, this project marks only the beginning: a new window into the internal architecture of the human body that could eventually extend to full-body imaging at ten to twenty times the current resolution.


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